How to use
SubChloroPred predict the proteins of chloroplast as well as sub-chloroplast location with very high sensitivity.
Input file format
>tr|A0A0K0KRG3|A0A0K0KRG3_HUMAN MHC class I antigen (Fragment) OS=Homo sapiens OX=9606 GN=HLA-B PE=3 SV=1 SHSMRYFHTSVSRPGRGEPRFITVGYVDDTLFVRFDSDAASPREEPRAPWIEQEGPEYWD RETQICKAKAQTDRENLRIALRYYNQSEAGSHTLQNMYGCDVGPDGRLLRGYHQDAYDGK DYFALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGECVEWLRRYLENGKETLQRA
SVM threshold selection
User can select probability score for False Positive Rate (FPR) from 'drop down options' of SVM threshold. It ranges from -1 to +1.
SubChloroPred result analysis
For each job, the first column of result table shows the Protein ID and second column shows the corresponding location of each sequence, and last cloumn represent prediction method.
