β-LacFamPred: HMM based prediction and annotation tool for β-lactamase families
Users can download β-LacFamPred datasets, modules and subsets from following the download links.
The tool used for the development of models for β-LacFamPred are available to the users for testing Beta-lactamase families predictions. Click here
V2.0: The detailed annotation of β-lactamase families is freely available for the users for further analysis. Click here
V1.0: The detailed annotation of β-lactamase families is freely available for the users for further analysis. Click here
V2.0: For large number of protein/gene sets (>100) we recommend to use standalone version of β-LacFamPred, downloaded from following link. Click here
V1.0: For large number of protein/gene sets (>100) we recommend to use standalone version of β-LacFamPred, downloaded from following link. Click here
V2.0: For Protein sequences scanning we recommend to use protein HMM profiles of β-LacFamPred, which can be downloaded from following link. We have also provided the sequences and MSAs of each families for users for their analysis. Click here
V1.0: For Protein sequences scanning we recommend to use protein HMM profiles of β-LacFamPred, which can be downloaded from following link. We have also provided the sequences and MSAs of each families for users for their analysis. Click here
V2.0: For Nucleotide sequences scanning we recommend to use nucleotide HMM profiles of β-LacFamPred, which can be downloaded from following link. We have also provided the sequences and MSAs of each families for users for their analysis. Click here
V1.0: For Nucleotide sequences scanning we recommend to use nucleotide HMM profiles of β-LacFamPred, which can be downloaded from following link. We have also provided the sequences and MSAs of each families for users for their analysis. Click here
Copyright © 2022 Department of Biophysics, University of Delhi South Campus