β-LacFamPred

β-LacFamPred: HMM based prediction and annotation tool for β-lactamase families

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How to use this tool

β-LacFamPred find the associated betalactamase families of your protein/gene sequences. This webtool can only predict up to 100 sequences at a time and if a user gives more than 100 sequences, it will automatically predict only first 100 sequences. Please use standalone version for batchmode prediction of Beta-lactamase families β-LacFamPred.

Job Launcher

Enter sequence below in FASTA format ( '>' is mandatory)

Select Sequence (Fasta File)

Select HMM Profile

Advanced Search Options
(Use below options for advanced search)

Select e-value

Set number of hits

Please be cautious higher the e-value would result in low scores predictions, while lower e-value would result in high score predictions.

*Note: The e-value: 1e-10 or below can be better for accurate prediction

For more than one sequence, please do not set number of hits 1 depending on your query sequences please set the number of hits. Let suppose you have submitted 10 sequences so please set 10 number of hits

OR Upload Sequence (FASTA) File:

Example fasta sequence